rs28936679

A SNP in the AANAT gene on chromosome 17. Its most notable genotype is A;G: in Japanese, possible delayed sleep phase condition

Gene
AANAT
Location
Chr 1776,469,731 (GRCh38)
Highest magnitude
2.0Worth knowing
Tested on
23andMe
Minor allele frequency
<1%

Genotypes

As shown in 23andMe and AncestryDNA files.

  1. A;GMost notableBadin Japanese, possible delayed sleep phase conditionWorth knowing · 2.0
  2. G;GGoodcommon in complete genomicsTypical · 0.0

On SNPedia: (A;G), (G;G). Magnitude rates how notable a genotype is from 0 to 10, not how risky it is.

Conditions, medicines and genes

Notes

From SNPedia

Show notes, about 140 words

rs28936679, also known as Ala129Thr or A129T (and also G619A), is a SNP in the aralkylamine N-acetyltransferase AANAT gene. The AANAT protein plays a unique role in vertebrate biology by controlling rhythmic production of melatonin in the pineal gland. Its activity increases 10- to 100-fold at night, leading to increased production and release of melatonin. In a 2003 report about Japanese patients with a sleep disorder known as susceptibility to delayed sleep phase syndrome, patient genotypes had a higher frequency of the rs28936679(A) allele. A later report based on Brazilian (primarily Caucasian) patients including those with delayed sleep phase syndrome found no variation at this SNP.

A;G

This genotype has been reported to be associated with delayed sleep phase syndrome in a Japanese group of patients.

Source and license

Adapted from rs28936679 on SNPedia, using a snapshot taken October 16, 2026. SNPedia content is shared under CC BY-NC-SA 3.0 US, and this page is shared under the same license.

SNPedia is a community-edited wiki. Its entries can be incomplete, out of date or wrong, and nothing here is a diagnosis or medical advice. Magnitude is a community rating of how interesting a genotype is, not a risk score.