rs471364

A SNP in the TTC39B gene on chromosome 9. Its most notable genotype is T;T: common in complete genomics

Gene
TTC39B
Location
Chr 915,289,580 (GRCh38)
Highest magnitude
0.0Typical
Tested on
23andMe, AncestryDNA
Minor allele frequency
10%

Genotypes

Plus strand, as in 23andMe and AncestryDNA files.

  1. T;TMost notableGoodcommon in complete genomicsTypical · 0.079% of people

SNPedia records rs471364 on the minus strand: (A;A). Magnitude rates how notable a genotype is from 0 to 10, not how risky it is.

Frequency

Share of each genotype in 11 HapMap populations.

  • AverageT;T 79%
  • European ancestry (Utah)T;T 80%
  • Han Chinese (Beijing)T;T 97%
  • Japanese (Tokyo)T;T 94%
  • Yoruba (Nigeria)T;T 65%
  • African ancestry (Southwest US)T;T 70%
  • Chinese (Denver)T;T 98%
  • Gujarati IndianT;T 85%
  • Luhya (Kenya)T;T 67%
  • Mexican ancestry (Los Angeles)T;T 93%
  • Maasai (Kenya)T;T 49%
  • TuscanT;T 76%

Conditions, medicines and genes

Notes

From SNPedia

Show notes, about 120 words

per the 23andMe blog, the minor allele of this SNP (C) was associated with decreased HDL cholesterol {| border="1" |- !SNP !Rarer allele !LDL !HDL !TG |- | rs6544713 || T || + || || |- | rs2650000 || A || + || || |- | rs471364 || C || || - || |- | rs1800961 || T || || - || |- | rs7679 || C || || - || + |- | rs2967605 || T || || - || |- | rs2409722 || T || || || - |- | rs10903129 || A || - || - || - |- | rs6756629 || A || - || + || - |- | rs12670798 || C || + || + || + |- | rs7395662 || A || - || + || + |- | rs174570 || T || - || - || + |- | rs2271293 || A || - || + || - |- | rs2624265 || C || || || + |- | rs2167079 || T || || + || |- | rs9891572 || T || || + || |- | rs4844614 || T || + || || |- | rs5031002 || G || + || || |- |}

Source and license

Adapted from rs471364 on SNPedia, using a snapshot taken October 16, 2026. SNPedia content is shared under CC BY-NC-SA 3.0 US, and this page is shared under the same license.

SNPedia is a community-edited wiki. Its entries can be incomplete, out of date or wrong, and nothing here is a diagnosis or medical advice. Magnitude is a community rating of how interesting a genotype is, not a risk score.