rs1980493
A SNP in the LOC101929163 gene on chromosome 6. Its most notable genotype is T;T: common on affy axiom data
- Gene
- LOC101929163
- Location
- Chr 632,395,438 (GRCh38)
- Highest magnitude
- 0.0Typical
- Tested on
- 23andMe, AncestryDNA
- Minor allele frequency
- 9%
Genotypes
Plus strand, as in 23andMe and AncestryDNA files.
SNPedia records rs1980493 on the minus strand: (A;A). Magnitude rates how notable a genotype is from 0 to 10, not how risky it is.
Frequency
Share of each genotype in 11 HapMap populations.
- AverageT;T 84%
- European ancestry (Utah)T;T 81%
- Han Chinese (Beijing)T;T 91%
- Japanese (Tokyo)T;T 89%
- Yoruba (Nigeria)T;T 83%
- African ancestry (Southwest US)T;T 75%
- Chinese (Denver)T;T 95%
- Gujarati IndianT;T 98%
- Luhya (Kenya)T;T 79%
- Mexican ancestry (Los Angeles)T;T 88%
- Maasai (Kenya)T;T 66%
- TuscanT;T 78%
Related
Other LOC101929163 SNPs
- rs3129934T;T3.3x increased risk for multiple sclerosisWorth knowing
- rs498422G;G>1.42x slightly higher risk for infertility in Chinese menMinor
- rs10947262C;C1.3x increased risk for osteoarthritisMinor
- rs2076530T;T2x risk for sarcoidosisTypical
- rs2395148G;Gcommon in complete genomicsTypical
- rs3117103A;Acommon on affy axiom dataTypical
- rs3130340T;TNo summary available.Typical
- rs3763305G;Gcommon in complete genomicsTypical
Notes
From SNPedia
Notes
Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX. Genome-wide association study of rheumatoid arthritis by a score test based on wavelet transformation.
Source and license
Adapted from rs1980493 on SNPedia, using a snapshot taken October 16, 2026. SNPedia content is shared under CC BY-NC-SA 3.0 US, and this page is shared under the same license.
SNPedia is a community-edited wiki. Its entries can be incomplete, out of date or wrong, and nothing here is a diagnosis or medical advice. Magnitude is a community rating of how interesting a genotype is, not a risk score.