rs9923231
A SNP in the VKORC1 gene on chromosome 16. Its most notable genotype is T;T: reduced warfarin dose if treated for VTE
- Gene
- VKORC1
- Location
- Chr 1631,096,368 (GRCh38)
- Highest magnitude
- 2.1Worth knowing
- Tested on
- 23andMe, AncestryDNA
- Minor allele frequency
- 47%
Genotypes
As shown in 23andMe and AncestryDNA files.
- C;CGoodnormal
- C;TNot ratedreduced warfarin dose if treated for VTE
- T;TMost notableNot ratedreduced warfarin dose if treated for VTE
On SNPedia: (C;C), (C;T), (T;T). Magnitude rates how notable a genotype is from 0 to 10, not how risky it is.
Frequency
Share of each genotype in 11 HapMap populations.
- AverageC;C 45% C;T 25% T;T 30%
- European ancestry (Utah)C;C 40% C;T 41% T;T 20%
- Han Chinese (Beijing)C;C 0% C;T 10% T;T 91%
- Japanese (Tokyo)C;C 0% C;T 19% T;T 81%
- Yoruba (Nigeria)C;C 94% C;T 6% T;T 0%
- African ancestry (Southwest US)C;C 84% C;T 11% T;T 5%
- Chinese (Denver)C;C <1% C;T 17% T;T 83%
- Gujarati IndianC;C 65% C;T 33% T;T 2%
- Luhya (Kenya)C;C 88% C;T 12% T;T 0%
- Mexican ancestry (Los Angeles)C;C 29% C;T 48% T;T 22%
- Maasai (Kenya)C;C 70% C;T 28% T;T 2%
- TuscanC;C 28% C;T 51% T;T 22%
Related
Conditions, medicines and genes
Notes
From SNPedia
Show notes, about 190 words
Several SNPs in the VKORC1 gene have been linked to warfarin sensitivity, with perhaps the most common being this SNP rs9923231. Note that the orientation as published in scientific articles is often on the opposite strand compared to the orientation in dbSNP, so you will sometimes see it as a G>A snp. It is also known as *-1639G>A with the minus indicating that this is in an upstream promoter *3673 based on its position in GenBank accession number AY587020. *VKORC1*2. The main findings related to the treatment of venous thromboembolism (aka VTE; from hypercoagulability) with the blood thinner warfarin for this SNP are that carriers of the rs9923231(T) allele require significantly reduced doses of warfarin, and are (otherwise) at a higher risk of serious bleeding. Clinical studies demonstrate that rs9923231(A), and the tightly linked intron1 SNP rs9934438(T) predict warfarin dose more accurately than intron 2 SNP 1542G>C in blacks. Increased warfarin dose requirement in blacks was accounted for by lower frequency of the rs9923231(T) allele. Therefore, the T allele at rs9923231 is a suitable biomarker for warfarin dosing across ethnic populations.
Source and license
Adapted from rs9923231 on SNPedia, using a snapshot taken October 16, 2026. SNPedia content is shared under CC BY-NC-SA 3.0 US, and this page is shared under the same license.
SNPedia is a community-edited wiki. Its entries can be incomplete, out of date or wrong, and nothing here is a diagnosis or medical advice. Magnitude is a community rating of how interesting a genotype is, not a risk score.