rs2240017

A SNP in the TBX21 gene on chromosome 17. Its most notable genotype is G;G: not observed (too rare)

Gene
TBX21
Location
Chr 1747,733,553 (GRCh38)
Highest magnitude
0.0Typical
Tested on
23andMe
Minor allele frequency
4%

Genotypes

Plus strand, as in 23andMe and AncestryDNA files.

  1. G;GMost notableNot ratednot observed (too rare)Typical · 0.02% of people
  2. C;GNot ratedrespond better to steroidsTypical · 0.08% of people
  3. C;CGoodcommonTypical · 0.090% of people

SNPedia records rs2240017 on the minus strand: (C;C), (C;G), (G;G). Magnitude rates how notable a genotype is from 0 to 10, not how risky it is.

Frequency

Share of each genotype in 4 HapMap populations.

  • AverageG;G 2% C;G 8% C;C 90%
  • European ancestry (Utah)G;G 0% C;G 0% C;C 100%
  • Han Chinese (Beijing)G;G 2% C;G 18% C;C 80%
  • Japanese (Tokyo)G;G 7% C;G 14% C;C 80%
  • Yoruba (Nigeria)G;G 0% C;G 0% C;C 100%

Notes

From SNPedia

Show notes, about 190 words

This SNP encodes a variation in the 33rd amino acid of the protein encoded by the TBX21 gene. Although 95% or so of all Caucasians carry two copies of the rs2240017(G) allele, as oriented in dbSNP orientation, and are thus rs2240017(G;G) homozygotes, a few individuals are rs2240017(C;G) heterozygotes. These heterozgotes are reported to improve better over time in response to corticosteroid treatment for asthma than the rs2240017(G;G) homozygotes. So far, studies have not linked, however, this SNP to any change in the overall risk of asthma itself. Although the effect observed was strong, in that treating rs2240017(C;G) heterozygotes ultimately (over 4 years) yields average airway responsiveness in the normal range (i.e. in the same range as for nonasthmatics), the authors point out that the relatively small number of heterozygous children studied indicates that a larger study is warranted to ensure reproducibility. It is also unknown whether the effect is limited to the particular corticosteroid used (budesonide, aka Rhinocort) in this study. This is thought to be unlikely, though, given the general nature of the drug.

Source and license

Adapted from rs2240017 on SNPedia, using a snapshot taken October 16, 2026. SNPedia content is shared under CC BY-NC-SA 3.0 US, and this page is shared under the same license.

SNPedia is a community-edited wiki. Its entries can be incomplete, out of date or wrong, and nothing here is a diagnosis or medical advice. Magnitude is a community rating of how interesting a genotype is, not a risk score.