rs2240017
A SNP in the TBX21 gene on chromosome 17. Its most notable genotype is G;G: not observed (too rare)
- Gene
- TBX21
- Location
- Chr 1747,733,553 (GRCh38)
- Highest magnitude
- 0.0Typical
- Tested on
- 23andMe
- Minor allele frequency
- 4%
Genotypes
Plus strand, as in 23andMe and AncestryDNA files.
SNPedia records rs2240017 on the minus strand: (C;C), (C;G), (G;G). Magnitude rates how notable a genotype is from 0 to 10, not how risky it is.
Frequency
Share of each genotype in 4 HapMap populations.
- AverageG;G 2% C;G 8% C;C 90%
- European ancestry (Utah)G;G 0% C;G 0% C;C 100%
- Han Chinese (Beijing)G;G 2% C;G 18% C;C 80%
- Japanese (Tokyo)G;G 7% C;G 14% C;C 80%
- Yoruba (Nigeria)G;G 0% C;G 0% C;C 100%
Related
Conditions, medicines and genes
Other TBX21 SNPs
- rs4794067C;C2.1x risk for Aspirin Induced Asthma. But possibly lower risk of lupus and intractable Graves' disease.Worth knowing
- rs11650354T;T8x risk for allergic asthmaWorth knowing
- rs17250932C;CReduced risk of lupus and intractable Graves' disease.Worth knowing
- rs2074190G;G2.2x risk for AIATypical
- rs16947078A;AcommonTypical
Notes
From SNPedia
Show notes, about 190 words
This SNP encodes a variation in the 33rd amino acid of the protein encoded by the TBX21 gene. Although 95% or so of all Caucasians carry two copies of the rs2240017(G) allele, as oriented in dbSNP orientation, and are thus rs2240017(G;G) homozygotes, a few individuals are rs2240017(C;G) heterozygotes. These heterozgotes are reported to improve better over time in response to corticosteroid treatment for asthma than the rs2240017(G;G) homozygotes. So far, studies have not linked, however, this SNP to any change in the overall risk of asthma itself. Although the effect observed was strong, in that treating rs2240017(C;G) heterozygotes ultimately (over 4 years) yields average airway responsiveness in the normal range (i.e. in the same range as for nonasthmatics), the authors point out that the relatively small number of heterozygous children studied indicates that a larger study is warranted to ensure reproducibility. It is also unknown whether the effect is limited to the particular corticosteroid used (budesonide, aka Rhinocort) in this study. This is thought to be unlikely, though, given the general nature of the drug.
Source and license
Adapted from rs2240017 on SNPedia, using a snapshot taken October 16, 2026. SNPedia content is shared under CC BY-NC-SA 3.0 US, and this page is shared under the same license.
SNPedia is a community-edited wiki. Its entries can be incomplete, out of date or wrong, and nothing here is a diagnosis or medical advice. Magnitude is a community rating of how interesting a genotype is, not a risk score.