MSH6

383 SNPs in the MSH6 gene, 233 with a genotype of magnitude 2 or higher.

Type: Gene
SNPs: 383
Notable: 233Magnitude 2 or higher
Well documented: 5
Genosets: 0

MSH6 SNPs

Every genotype, as shown in 23andMe and AncestryDNA files.

rs1800937Very important
- A;CLynch syndrome, pathogenic mutationBad
- C;Ccommon in clinvarGood
- C;GLynch syndrome, pathogenic mutationBad
- C;Tbenign polymorphismGood
- T;Tbenign polymorphismGood
rs2020912Worth knowing
- C;Tunclear if associated with hereditary nonpolyposis colorectal cancer (HNPCC5)Bad
- T;Tcommon in clinvarGood
rs1800932Typical
- A;Acommon in clinvarGood
rs1800935Typical
- T;Tcommon in clinvarGood
rs2020908Typical
- C;Ccommon in complete genomicsGood
rs587776706Very important
- -;-common in clinvarGood
- -;TCarrier of mismatch cancer repair syndrome mutation; effect unknownBad
- T;TMismatch repair cancer syndrome (predicted)Bad
rs63749821Very important
- -;-common in clinvarGood
- -;TALikely miscall in Ancestry data; otherwise, Lynch syndrome, pathogenic mutationBad
- I;INo summary available.Good
rs63749843Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs63749873Very important
- C;Ccommon in clinvarGood
- C;GLynch syndrome, pathogenic mutationBad
rs63749874Very important
- -;AAGALynch syndrome, pathogenic mutationBad
- AAAG;AAAGcommon in clinvarGood
- AAGA;AAGAcommon in clinvarGood
- I;INo summary available.Good
rs63749919Very important
- A;Acommon in clinvarGood
- A;GLynch syndromeBad
rs63749938Very important
- -;ALynch Syndrome, pathogenic mutationBad
- A;Acommon in clinvarGood
- I;INo summary available.Good
rs63749942Very important
- -;CGTLynch syndrome, pathogenic mutationBad
- CGT;CGTcommon in clinvarGood
- GTC;GTCcommon in clinvarGood
- I;INo summary available.Good
rs63749980Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs63749999Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs63750019Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs63750075Very important
- -;GTLynch syndrome, pathogenic mutationBad
- GT;GTcommon in clinvarGood
- TG;TGcommon in clinvarGood
rs63750111Very important
- A;CLynch syndromeBad
- C;Ccommon in clinvarGood
- C;GLynch syndrome, pathogenic mutationBad
rs63750139Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs63750140Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs63750194Very important
- -;TALynch syndrome, pathogenic mutationBad
- AT;ATcommon in clinvarGood
- T;Tcommon in clinvarGood
- TA;TAcommon in clinvarGood
rs63750196Very important
- -;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs63750258Very important
- G;Gcommon in clinvarGood
- G;TLynch syndrome, pathogenic mutationBad
rs63750262Very important
- -;-common in clinvarGood
- -;AATGLynch syndrome, pathogenic mutationBad
- I;INo summary available.Good
rs63750296Very important
- -;-common in clinvarGood
- -;ALynch syndrome, pathogenic mutationBad
rs63750342Very important
- A;GLynch syndrome, pathogenic mutationBad
- G;Gcommon in clinvarGood
rs63750356Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs63750357Very important
- -;-common in clinvarGood
- -;ATTALynch syndrome, pathogenic mutationBad
- I;INo summary available.Good
rs63750377Very important
- -;ALynch syndrome, pathogenic mutationBad
- A;Acommon in clinvarGood
- I;INo summary available.Good
rs63750439Very important
- -;ATLynch syndrome, pathogenic mutationBad
- AT;ATcommon in clinvarGood
- TA;TAcommon in clinvarGood
rs63750523Very important
- -;-common in clinvarGood
- -;AACTTGLynch syndromeBad
- -;AATAGCAAATGCAGTTGTTAAAGAACTTGLynch syndrome, pathogenic mutationBad
rs63750552Very important
- G;Gcommon in clinvarGood
- G;TLynch syndrome, pathogenic mutationBad
rs63750554Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs63750563Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs63750564Very important
- A;CLynch syndrome, pathogenic mutationBad
- C;Ccommon in clinvarGood
- C;GLynch syndromeBad
rs63750617Very important
- C;Ccommon in clinvarGood
- C;TLynch syndromeBad
rs63750647Very important
- -;CCTLynch syndromeBad
- CTC;CTCcommon in clinvarGood
rs63750731Very important
- -;-common in clinvarGood
- -;TLynch syndrome, pathogenic mutationBad
- I;INo summary available.Good
rs63750735Very important
- -;AAAGLynch syndrome, pathogenic mutationBad
- AAAG;AAAGcommon in clinvarGood
rs63750741Very important
- C;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs63750767Very important
- -;-common in clinvarGood
- -;TCAAAAGGGACATAGAAAALynch syndrome, pathogenic mutationBad
- I;INo summary available.Good
rs63750833Very important
- -;AGLynch syndrome, pathogenic mutationBad
- AG;AGcommon in clinvarGood
rs63750854Very important
- -;-common in clinvarGood
- -;TGLynch syndrome, pathogenic mutationBad
rs63750904Very important
- -;GTLynch syndrome, pathogenic mutationBad
- GT;GTcommon in clinvarGood
- I;INo summary available.Good
- TG;TGcommon in clinvarGood
rs63750909Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs63750940Very important
- -;CTCCTGGALynch syndrome, pathogenic mutationBad
- CTCCTGGA;CTCCTGGAcommon in clinvarGood
- D;DNo summary available.Good
rs63750955Very important
- -;-common in clinvarGood
- -;TLynch syndrome, pathogenic mutationBad
- I;INo summary available.Good
rs63750996Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs63751017Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs63751058Very important
- G;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs63751077Very important
- A;CLynch syndrome, pathogenic mutationBad
- C;Ccommon in clinvarGood
- C;GLynch syndromeBad
rs63751090Very important
- -;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs63751127Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs63751167Very important
- -;-common in clinvarGood
- -;GTGALynch syndrome, pathogenic mutationBad
- D;DNo summary available.Good
rs63751319Very important
- -;GGAGACTLynch syndrome, pathogenic mutationBad
- GGAGACT;GGAGACTcommon in clinvarGood
- I;INo summary available.Good
rs63751321Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs63751327Very important
- -;-common in clinvarGood
- -;ALynch syndrome, pathogenic mutationBad
- -;AALynch syndromeBad
- I;INo summary available.Good
rs63751328Very important
- A;GLynch syndromeBad
- G;Gcommon in clinvarGood
rs63751407Very important
- -;CTLynch syndrome, pathogenic mutationBad
- -;TCLynch syndromeBad
- CT;CTcommon in clinvarGood
- I;Icommon genotypeGood
- TC;TCcommon in clinvarGood
rs63751410Very important
- -;GALynch syndrome, pathogenic mutationBad
- GA;GAcommon in clinvarGood
rs63751419Very important
- C;Ccommon in clinvarGood
- C;GLynch syndrome, pathogenic mutationBad
rs63751442Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs71539659Very important
- -;CLynch syndrome, pathogenic mutationBad
- C;Ccommon in clinvarGood
rs146816935Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs193922343Very important
- -;AAGAALynch syndromeBad
- -;AGAALynch syndrome, pathogenic mutationBad
- AAAG;AAAGcommon in clinvarGood
- AGAA;AGAAcommon in clinvarGood
rs267608035Very important
- A;GLynch syndrome, pathogenic mutationBad
- G;Gcommon in clinvarGood
rs267608036Very important
- A;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs267608037Very important
- -;AGLynch syndrome, pathogenic mutationBad
- AG;AGcommon in clinvarGood
- GA;GAcommon in clinvarGood
rs267608041Very important
- -;ALynch syndromeBad
- A;Acommon in clinvarGood
rs267608042Very important
- -;TTLynch syndrome, pathogenic mutationBad
- TT;TTcommon in clinvarGood
rs267608046Very important
- G;Gcommon in clinvarGood
- G;TLynch syndrome, pathogenic mutationBad
rs267608048Very important
- C;Ccommon in clinvarGood
- C;GLynch syndrome, pathogenic mutationBad
rs267608049Very important
- AG;TCLynch syndrome, pathogenic mutationBad
- TC;TCcommon in clinvarGood
rs267608050Very important
- -;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs267608055Very important
- A;TLynch syndrome, pathogenic mutationBad
- G;TLynch syndromeBad
- T;Tcommon in clinvarGood
rs267608056Very important
- -;CLynch syndrome, pathogenic mutationBad
- C;Ccommon in clinvarGood
rs267608057Very important
- -;CTLynch syndrome, pathogenic mutationBad
- CT;CTcommon in clinvarGood
rs267608058Very important
- -;TCAGLynch syndrome, pathogenic mutationBad
- CAGT;CAGTcommon in clinvarGood
- TCAG;TCAGcommon in clinvarGood
rs267608059Very important
- G;Gcommon in clinvarGood
- G;TLynch syndrome, pathogenic mutationBad
rs267608062Very important
- -;-common in clinvarGood
- -;GLynch syndromeBad
- -;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs267608063Very important
- -;-common in clinvarGood
- -;ALynch syndrome, pathogenic mutationBad
rs267608064Very important
- -;AAAALynch syndrome, pathogenic mutationBad
- AAAA;AAAAcommon in clinvarGood
rs267608065Very important
- -;GTLynch syndrome, pathogenic mutationBad
- GT;GTcommon in clinvarGood
- TG;TGcommon in clinvarGood
rs267608066Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs267608068Very important
- A;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs267608072Very important
- -;TGLynch syndrome, pathogenic mutationBad
- TG;TGcommon in clinvarGood
rs267608076Very important
- -;AGLynch syndrome, pathogenic mutationBad
- AG;AGcommon in clinvarGood
rs267608077Very important
- -;AGAGALynch syndrome, pathogenic mutationBad
- AAGAG;AAGAGcommon in clinvarGood
- AGAGA;AGAGAcommon in clinvarGood
rs267608078Very important
- -;CLynch syndrome, pathogenic mutationBad
- -;CCLynch syndromeBad
- C;Ccommon in clinvarGood
rs267608082Very important
- -;TGLynch syndrome, pathogenic mutationBad
- TG;TGcommon in clinvarGood
rs267608083Very important
- -;-common in clinvarGood
- -;ALynch syndromeBad
rs267608084Very important
- G;Gcommon in clinvarGood
- G;TLynch syndrome, pathogenic mutationBad
rs267608085Very important
- -;CTATLynch syndrome, pathogenic mutationBad
- CTAT;CTATcommon in clinvarGood
rs267608086Very important
- G;Gcommon in clinvarGood
- G;TLynch syndrome, pathogenic mutationBad
rs267608087Very important
- -;-common in clinvarGood
- -;CLynch syndrome, pathogenic mutationBad
- A;Acommon in clinvarGood
rs267608088Very important
- -;-common in clinvarGood
- -;TLynch syndrome, pathogenic mutationBad
rs267608090Very important
- -;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs267608091Very important
- -;-common in clinvarGood
- -;TLynch syndrome, pathogenic mutationBad
rs267608092Very important
- -;TLynch syndromeBad
- -;TTLynch syndrome, pathogenic mutationBad
- TT;TTcommon in clinvarGood
rs267608093Very important
- -;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs267608094Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs267608095Very important
- -;-common in clinvarGood
- -;TLynch syndrome, pathogenic mutationBad
rs267608096Very important
- A;GLynch syndrome, pathogenic mutationBad
- G;Gcommon in clinvarGood
rs267608098Very important
- A;Acommon in clinvarGood
- A;GLynch syndrome, pathogenic mutationBad
- A;TLynch syndromeBad
rs267608099Very important
- -;AGTGLynch syndrome, pathogenic mutationBad
- AGTG;AGTGcommon in clinvarGood
- GAGT;GAGTcommon in clinvarGood
rs267608101Very important
- -;-common in clinvarGood
- -;GTTTLynch syndrome, pathogenic mutationBad
rs267608106Very important
- -;GGTALynch syndrome, pathogenic mutationBad
- GGTA;GGTAcommon in clinvarGood
- TAGG;TAGGcommon in clinvarGood
rs267608111Very important
- A;Acommon in clinvarGood
- A;CLynch syndrome, pathogenic mutationBad
rs267608112Very important
- -;TAACAGLynch syndrome, pathogenic mutationBad
- TAACAG;TAACAGcommon in clinvarGood
rs267608114Very important
- -;ATLynch syndrome, pathogenic mutationBad
- AT;ATcommon in clinvarGood
rs267608118Very important
- -;-common in clinvarGood
- -;ALynch syndrome, pathogenic mutationBad
rs267608120Very important
- -;CAAGLynch syndrome, pathogenic mutationBad
- AAGC;AAGCcommon in clinvarGood
- CAAG;CAAGcommon in clinvarGood
rs267608121Very important
- -;-common in clinvarGood
- -;GTCALynch syndrome, pathogenic mutationBad
rs267608122Very important
- A;GLynch syndrome, pathogenic mutationBad
- G;Gcommon in clinvarGood
rs267608124Very important
- -;-common in clinvarGood
- -;ATCALynch syndrome, pathogenic mutationBad
rs267608126Very important
- -;-common in clinvarGood
- -;TTCALynch syndrome, pathogenic mutationBad
rs267608127Very important
- -;-common in clinvarGood
- -;AAGTLynch syndrome, pathogenic mutationBad
rs267608128Very important
- -;-common in clinvarGood
- -;ATTALynch syndrome, pathogenic mutationBad
rs267608130Very important
- -;AAAGCTALynch syndrome, pathogenic mutationBad
- AAAGCTA;AAAGCTAcommon in clinvarGood
- CTAAAAG;CTAAAAGcommon in clinvarGood
rs267608131Very important
- C;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs374230313Very important
- A;CLynch syndromeBad
- C;Ccommon in clinvarGood
- C;GLynch syndromeBad
rs397515875Very important
- A;GLynch syndromeBad
- G;Gcommon in clinvarGood
rs398123231Very important
- C;Ccommon in clinvarGood
- C;GLynch syndromeBad
rs398123232Very important
- -;AGLynch syndromeBad
- AG;AGcommon in clinvarGood
rs587776704Very important
- -;TCLynch syndrome, pathogenic mutationBad
- TC;TCcommon in clinvarGood
rs587779203Very important
- -;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs587779206Very important
- -;ATGAGLynch syndrome, pathogenic mutationBad
- GAGAT;GAGATcommon in clinvarGood
rs587779208Very important
- A;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs587779209Very important
- -;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs587779212Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs587779215Very important
- C;Ccommon in clinvarGood
- C;GLynch syndrome, pathogenic mutationBad
rs587779216Very important
- -;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs587779217Very important
- -;-common in clinvarGood
- -;TLynch syndrome, pathogenic mutationBad
rs587779218Very important
- G;TCLynch syndrome, pathogenic mutationBad
- TC;TCcommon in clinvarGood
rs587779219Very important
- -;AALynch syndrome, pathogenic mutationBad
- AA;AAcommon in clinvarGood
rs587779220Very important
- C;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs587779221Very important
- -;-common in clinvarGood
- -;ALynch syndrome, pathogenic mutationBad
rs587779226Very important
- -;-common in clinvarGood
- -;CTLynch syndrome, pathogenic mutationBad
rs587779227Very important
- A;GLynch syndrome, pathogenic mutationBad
- G;Gcommon in clinvarGood
rs587779231Very important
- C;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs587779232Very important
- A;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs587779234Very important
- A;GLynch syndrome, pathogenic mutationBad
- G;Gcommon in clinvarGood
rs587779237Very important
- -;TGLynch syndrome, pathogenic mutationBad
- TG;TGcommon in clinvarGood
rs587779241Very important
- -;-common in clinvarGood
- -;TLynch syndrome, pathogenic mutationBad
rs587779243Very important
- -;GATTLynch syndrome, pathogenic mutationBad
- ATTG;ATTGcommon in clinvarGood
- GATT;GATTcommon/normalGood
rs587779244Very important
- C;TCTLynch syndrome, pathogenic mutationBad
- TCT;TCTcommon in clinvarGood
rs587779245Very important
- A;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs587779246Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs587779247Very important
- -;GLynch syndrome, pathogenic mutationBad
- G;Gcommon in clinvarGood
rs587779250Very important
- -;CLynch syndrome, pathogenic mutationBad
- C;Ccommon in clinvarGood
rs587779251Very important
- -;ALynch syndrome, pathogenic mutationBad
- A;Acommon in clinvarGood
rs587779252Very important
- A;GLynch syndrome, pathogenic mutationBad
- G;Gcommon in clinvarGood
rs587779255Very important
- A;GLynch syndromeBad
- G;Gcommon in clinvarGood
- G;TLynch syndrome, pathogenic mutationBad
rs587779256Very important
- -;GALynch syndrome, pathogenic mutationBad
- AG;AGcommon in clinvarGood
rs587779258Very important
- -;-common in clinvarGood
- -;TLynch syndrome, pathogenic mutationBad
rs587779259Very important
- -;GAGCTTALynch syndrome, pathogenic mutationBad
- CTTAGAG;CTTAGAGcommon in clinvarGood
rs587779260Very important
- -;-common in clinvarGood
- -;CLynch syndrome, pathogenic mutationBad
rs587779263Very important
- G;Gcommon in clinvarGood
- G;TLynch syndrome, pathogenic mutationBad
rs587779267Very important
- G;Gcommon in clinvarGood
- G;TLynch syndrome, pathogenic mutationBad
rs587779274Very important
- -;TGCALynch syndrome, pathogenic mutationBad
- CATG;CATGcommon in clinvarGood
- TGCA;TGCAcommon in clinvarGood
rs587779279Very important
- A;GLynch syndrome, pathogenic mutationBad
- G;Gcommon in clinvarGood
rs587779287Very important
- -;GTACATTATTTTCLynch syndrome, pathogenic mutationBad
- TCGTACATTATTT;TCGTACATTATTTcommon in clinvarGood
rs587779288Very important
- -;-common in clinvarGood
- -;ATTALynch syndrome, pathogenic mutationBad
rs587779289Very important
- -;-common in clinvarGood
- -;ALynch syndrome, pathogenic mutationBad
rs587779291Very important
- -;TATGGTATGTGCAAATTGTTTTTTTCCACALynch syndrome, pathogenic mutationBad
- ACATATGGTATGTGCAAATTGTTTTTTTCC;ACATATGGTATGTGCAAATTGTTTTTTTCCcommon in clinvarGood
rs587779295Very important
- -;-common in clinvarGood
- -;ATCTCCCALynch syndromeBad
- -;TLynch syndrome, pathogenic mutationBad
rs587779296Very important
- -;-common in clinvarGood
- -;ATCTCCCALynch syndrome, pathogenic mutationBad
rs587779299Very important
- -;TGAGAAGATGALynch syndrome, pathogenic mutationBad
- TGAGAAGATGA;TGAGAAGATGAcommon in clinvarGood
rs587779301Very important
- -;-common in clinvarGood
- -;ATTTCSome evidence of miscall likelihood in 23andMe v5 data; otherwise, Lynch syndrome, pathogenic mutationBad
rs587779315Very important
- A;Acommon in clinvarGood
- A;TLynch syndrome, pathogenic mutationBad
rs587779318Very important
- C;Ccommon in clinvarGood
- C;TLynch syndrome, pathogenic mutationBad
rs587779319Very important
- -;GLynch syndrome, pathogenic mutationBad
- G;Gcommon in clinvarGood
rs587779320Very important
- -;-common in clinvarGood
- -;TLynch syndrome, pathogenic mutationBad
rs587779778Very important
- A;Acommon in clinvarGood
- A;CLynch syndrome, pathogenic mutationBad
rs587779914Very important
- A;GLynch syndromeBad
- G;Gcommon in clinvarGood
rs587779923Very important
- G;Gcommon/normalGood
- G;TLynch syndromeBad
rs587779936Very important
- -;-common in clinvarGood
- -;ACCALynch syndromeBad
rs587779941Very important
- -;AAAGLynch syndromeBad
- AAAG;AAAGcommon in clinvarGood
- I;Icommon genotypeGood
rs587779945Very important
- -;AGLynch syndromeBad
- AG;AGcommon in clinvarGood
rs587779948Very important
- G;Gcommon in clinvarGood
- G;TLynch syndromeBad
rs587780538Very important
- A;GLynch syndromeBad
- G;Gcommon in clinvarGood
rs587780670Very important
- -;-common in clinvarGood
- -;ALynch syndromeBad
rs587781372Very important
- C;Ccommon in clinvarGood
- C;TLynch syndromeBad
rs587781408Very important
- A;TLynch syndromeBad
- T;Tcommon in clinvarGood
rs587781544Very important
- -;GLynch syndromeBad
- G;Gcommon in clinvarGood
rs587781659Very important
- -;-common in clinvarGood
- -;CLynch syndromeBad
rs587781691Very important
- -;CLynch syndromeBad
- C;Ccommon in clinvarGood
rs587782111Very important
- -;-common in clinvarGood
- -;ALynch syndromeBad
rs587782172Very important
- -;AGGTGGGACACGGCAAGLynch syndromeBad
- GAGGTGGGACACGGCAA;GAGGTGGGACACGGCAAcommon in clinvarGood
rs587782281Very important
- -;TLynch syndromeBad
- T;Tcommon in clinvarGood
rs587782326Very important
- -;-common in clinvarGood
- -;ALynch syndromeBad
rs587782562Very important
- -;-common in clinvarGood
- -;ATGALynch syndromeBad
rs587782593Very important
- A;Acommon in clinvarGood
- A;TLynch syndromeBad
rs587782638Very important
- -;TLynch syndromeBad
- -;TTLynch syndromeBad
- TT;TTcommon in clinvarGood
rs587782712Very important
- -;AAGAALynch syndromeBad
- GAAAA;GAAAAcommon in clinvarGood
rs587782809Very important
- -;GLynch syndromeBad
- G;Gcommon in clinvarGood
rs587782862Very important
- -;GLynch syndromeBad
- G;Gcommon in clinvarGood
rs587783056Very important
- -;TTLynch syndromeBad
- I;Icommon genotypeGood
- TT;TTcommon in clinvarGood
rs730881816Very important
- A;CLynch syndromeBad
- C;Ccommon in clinvarGood
- C;GLynch syndromeBad
rs730881825Very important
- -;CLynch syndromeBad
- C;Ccommon in clinvarGood
rs730881826Very important
- -;-common in clinvarGood
- -;TLynch syndromeBad
rs730881827Very important
- -;AALynch syndromeBad
- AA;AAcommon in clinvarGood
rs730881828Very important
- -;-common in clinvarGood
- -;ACLynch syndromeBad
rs730881829Very important
- -;ALynch syndromeBad
- A;Acommon in clinvarGood
rs786201049Very important
- A;GLynch syndromeBad
- G;Gcommon in clinvarGood
rs786201084Very important
- -;-common in clinvarGood
- -;TLynch syndromeBad
rs786201855Very important
- -;-common in clinvarGood
- -;ATCALynch syndromeBad
rs786202108Very important
- -;CLynch syndromeBad
- C;Ccommon in clinvarGood
rs786202193Very important
- -;TTTTTTGATGACAGLynch syndromeBad
- ACAGTTTTTTGATG;ACAGTTTTTTGATGcommon in clinvarGood
- TTTTTTGATGACAG;TTTTTTGATGACAGcommon/normalGood
rs786202336Very important
- -;TGGAGLynch syndromeBad
- AGTGG;AGTGGcommon in clinvarGood
rs786202848Very important
- A;CLynch syndromeBad
- C;Ccommon in clinvarGood
rs786203331Very important
- -;-common in clinvarGood
- -;AGTALynch syndromeBad
rs786203597Very important
- A;Acommon in clinvarGood
- A;TLynch syndromeBad
rs786203712Very important
- -;-common in clinvarGood
- -;CLynch syndromeBad
- D;Dcommon genotypeGood
rs786203968Very important
- A;Acommon in clinvarGood
- A;TLynch syndromeBad
rs786204252Very important
- -;TTLynch syndromeBad
- TT;TTcommon in clinvarGood
rs863224473Very important
- C;Ccommon in clinvarGood
- C;TLynch syndromeBad
rs863224475Very important
- -;GLynch syndromeBad
- G;Gcommon in clinvarGood
rs863224476Very important
- -;ALynch syndromeBad
- A;Acommon in clinvarGood
- I;Icommon genotypeGood
rs863225406Very important
- -;CTLynch syndromeBad
- TC;TCcommon in clinvarGood
rs863225408Very important
- -;ACTTGLynch syndromeBad
- GACTT;GACTTcommon in clinvarGood
rs863225421Very important
- -;-common in clinvarGood
- -;GLynch syndromeBad
rs864622041Very important
- C;TLynch syndrome, pathogenic mutationBad
- T;Tcommon in clinvarGood
rs864622153Very important
- C;Ccommon in clinvarGood
- C;GLynch syndromeBad
rs864622435Very important
- G;Gcommon in clinvarGood
- G;TLynch syndromeBad
rs866771359Very important
- -;-common in clinvarGood
- -;TLynch syndromeBad
- T;Tcommon in clinvarGood
rs876660037Very important
- A;GLynch syndromeBad
- G;Gcommon in clinvarGood
rs876660095Very important
- C;GLynch syndromeBad
- G;Gcommon in clinvarGood
- G;TLynch syndromeBad
rs876660943Very important
- G;Gcommon in clinvarGood
- G;TLynch syndromeBad
rs878853718Very important
- C;Ccommon in clinvarGood
- C;TLynch syndromeBad
rs878853745Very important
- A;Acommon in clinvarGood
- A;GLynch syndromeBad
rs63750714Very important
- -;CUnclear significance; possible Lynch syndrome mutationBad
- C;Ccommon/normalGood
rs267608073Very important
- -;AAGVariant of uncertain significance; possible Lynch syndrome mutationBad
- AAG;AAGcommon/normalGood
rs587776705Very important
- -;GTGVariant of uncertain significance; possible Lynch syndrome mutationBad
- GTG;GTGcommon in clinvarGood
rs863225414Very important
- -;-common in clinvarGood
- -;ATTApossible Lynch syndrome mutationBad
rs864622257Very important
- -;GLynch syndrome (predicted)Bad
- G;Gcommon in clinvarGood

Conditions and medicines

Lynch syndromeCondition

Other SNPs

No notable genotype or detailed notes

Show 147 SNPs

rs1042821
rs41294988
rs63750119
rs63750138
rs63751113
rs63751234
rs63751405
rs77155169
rs182024561
rs193922344
rs200492211
rs267608119
rs575068534
rs587778533
rs587779204
rs587779285
rs587781271
rs587781362
rs587781398
rs587781462
rs587781650
rs587781870
rs587781924
rs587782275
rs587782277
rs587782386
rs587782425
rs587782706
rs730881824
rs730881830
rs748452299
rs750528093
rs751033488
rs753796271
rs754183111
rs760190301
rs760558287
rs761033647
rs763673818
rs763978082
rs765411990
rs766905993
rs768876235
rs771764652
rs775836476
rs777907133
rs786201042
rs786201043
rs786201050
rs786201052
rs786203924
rs786204048
rs786204180
rs863224474
rs863224614
rs863224829
rs863225398
rs863225399
rs863225400
rs863225401
rs863225402
rs863225403
rs863225404
rs863225407
rs863225409
rs863225411
rs863225412
rs863225416
rs863225417
rs863225418
rs863225420
rs864622585
rs869312769
rs869312770
rs876658296
rs876658497
rs876658604
rs876658728
rs876658817
rs876658848
rs876658864
rs876658881
rs876659189
rs876660118
rs876660386
rs876660549
rs876660630
rs876660853
rs876661025
rs876661033
rs876661044
rs876661073
rs876661125
rs876661171
rs876661193
rs876661205
rs876661222
rs876661251
rs878853702
rs878853709
rs878853711
rs878853721
rs878853729
rs878853736
rs878853739
rs878853742
rs886041913
rs1057517551
rs1057517552
rs1057517763
rs1057517764
rs1057520605
rs1057524912
rs1060502875
rs1060502876
rs1060502881
rs1060502882
rs1060502886
rs1060502888
rs1060502890
rs1060502891
rs1060502898
rs1060502901
rs1060502918
rs1060502926
rs1060502932
rs1060502937
rs1060502940
rs1060502941
rs1060502946
rs1064793183
rs1064793185
rs1064793489
rs1064793671
rs1064794028
rs1064794055
rs1064794075
rs1064794164
rs1064794302
rs1064794384
rs1064794388
rs1064794943
rs1064795256
rs1064795591
rs1064795629
rs1064795768
rs1064795960

Source and license

Adapted from MSH6 on SNPedia, using a snapshot taken October 16, 2026. SNPedia content is shared under CC BY-NC-SA 3.0 US, and this page is shared under the same license.

SNPedia is a community-edited wiki. Its entries can be incomplete, out of date or wrong, and nothing here is a diagnosis or medical advice. Magnitude is a community rating of how interesting a genotype is, not a risk score.

MSH6 SNPs

Related

Conditions and medicines

Other SNPs

Source and license