Chromosome 15
257 well-documented SNPs on chromosome 15, in order of position (GRCh38).
- rs1009153CYFIP1 · 22,896,157G;Gcommon/normal in ClinVarTypical
- rs802771424,719,450G;Gcommon in complete genomicsTypical
- rs6576507LOC100128714 · 26,043,247T;Tcommon in complete genomicsTypical
- rs2912602LOC105370740 · 26,474,092G;Gcommon in complete genomicsTypical
- rs25409GABRB3 · 26,773,694G;GNo summary available.Typical
- rs4906902GABRB3 · 26,774,621A;Acommon in complete genomicsTypical
- rs968671GABRG3 · 27,208,761A;Acommon in complete genomicsTypical
- rs17137734GABRG3 · 27,262,626C;Ccommon genotypeTypical
- rs17565841OCA2 · 27,752,101G;Gcommon on affy axiom dataTypical
- rs1800419OCA2 · 27,851,392A;Acommon in clinvarTypical
- rs1800414OCA2 · 27,951,891T;Tcommon in complete genomicsTypical
- rs1800407OCA2 · 27,985,172T;Tgreen/hazel/brown/black eyes more likelyMinor
- rs4778138OCA2 · 28,090,674A;Afreckles more likelyMinor
- rs7495174OCA2 · 28,099,092A;Ablue/gray eyes more likelyTypical
- rs12913832HERC2 · 28,120,472G;Gblue eye color, 99% of the timeWorth knowing
- rs11636232HERC2 · 28,141,480T;Tlighter eye colorMinor
- rs1667394HERC2 · 28,285,036T;Tblond hair & blue eyes is 4x more likelyMinor
- rs716370228,460,135A;Ccommon in complete genomicsTypical
- rs17680945APBA2 · 28,947,614G;Gcommon genotypeTypical
- rs17815774TRPM1 · 31,042,159C;Ccommon in complete genomicsTypical
- rs6494223CHRNA7 · 32,104,256C;CnormalTypical
- rs1696968132,700,910C;Ccommon in complete genomicsTypical
- rs477958432,702,555C;T1.23x risk for colorectal cancerWorth knowing
- rs12593365FMN1 · 32,815,789T;Tcommon in complete genomicsTypical
- rs35583475SLC12A6 · 34,254,503G;TCarrier of an Andermann syndrome mutationImportant
- rs7164902SLC12A6 · 34,258,881G;Gcommon in clinvarTypical
- rs533021ACTC1 · 34,788,730T;Tcommon in clinvarTypical
- rs589759ACTC1 · 34,789,373C;Ccommon in clinvarTypical
- rs1370154ACTC1 · 34,790,024C;Ccommon in clinvarTypical
- rs1696646038,219,782C;Ccommon in complete genomicsTypical
- rs11073328FAM98B · 38,472,642T;Tincreased longevity?Worth knowing
- rs2228261THBS1 · 39,588,157C;Ccommon in clinvarTypical
- rs2292305THBS1 · 39,588,621A;Acommon in clinvarTypical
- rs587777104EIF2AK4 · 39,953,957G;GPulmonary venoocclusive diseaseVery important
- rs587777102EIF2AK4 · 39,967,718-;-Pulmonary venoocclusive diseaseVery important
- rs587777105EIF2AK4 · 40,007,064T;TPulmonary venoocclusive diseaseVery important
- rs587777208EIF2AK4 · 40,008,067T;TPulmonary venoocclusive diseaseVery important
- rs587777207EIF2AK4 · 40,016,508T;TPulmonary venoocclusive diseaseVery important
- rs587777103EIF2AK4 · 40,016,544T;TPulmonary venoocclusive diseaseVery important
- rs2250402EIF2AK4 · 40,030,351G;Gcommon in clinvarTypical
- rs1801376LOC107984763 · 40,185,630A;ANo summary available.Typical
- rs28989187LOC107984763 · 40,202,609G;Gcommon in clinvarTypical
- rs28989181LOC107984763 · 40,212,643C;Ccommon in clinvarTypical
- rs2034650IVD · 40,425,103G;G0.13x risk of pulmonary fibrosis in KoreansTypical
- rs7177192KNL1 · 40,606,445G;Gcommon in clinvarTypical
- rs12911738KNL1 · 40,611,486A;Acommon in clinvarTypical
- rs2412541KNL1 · 40,621,642G;Gcommon in clinvarTypical
- rs11858113KNL1 · 40,621,979T;Tcommon in clinvarTypical
- rs8040502KNL1 · 40,622,992A;Acommon in clinvarTypical
- rs2412710CAPN3 · 42,391,589G;Gcommon in complete genomicsTypical
- rs16957063STARD9 · 42,692,090A;Acommon in complete genomicsTypical
- rs8023524CDAN1 · 42,728,785G;Gcommon in clinvarTypical
- rs12917189CDAN1 · 42,731,284T;Tcommon in clinvarTypical
- rs12050604UBR1 · 43,065,208A;Aslightly increased risk for lung cancerMinor
- rs748404TGM5 · 43,267,033T;Tslightly increased risk (1.25) for lung cancerMinor
- rs16948098FRMD5 · 43,927,409G;Gcommon genotypeTypical
- rs2453274CTDSPL2 · 44,482,004C;CNo summary available.Typical
- rs4774518DUOXA2 · 45,117,274C;Ccommon in clinvarTypical
- rs17215633LOC101928414 · 45,267,576T;Tcommon in complete genomicsTypical
- rs171924745,328,787C;Ccommon in clinvarTypical
- rs1346268GATM · 45,380,831T;Tcommon in clinvarTypical
- rs2433610GATM · 45,393,893C;Ccommon genotypeTypical
- rs183464048,099,968A;Acommon in complete genomicsTypical
- rs16960620SLC24A5 · 48,124,702A;Acommon in complete genomicsTypical
- rs2555364SLC24A5 · 48,127,189G;Gcommon in complete genomicsTypical
- rs1426654SLC24A5 · 48,134,287A;Aprobably light-skinned, European ancestryWorth knowing
- rs1552311LOC107984755 · 48,288,516C;Ccommon in complete genomicsTypical
- rs363811FBN1 · 48,421,982C;Ccommon in clinvarTypical
- rs363815FBN1 · 48,437,370A;GMarfan syndrome mutationVery important
- rs363808FBN1 · 48,445,375C;Ccommon in clinvarTypical
- rs363807FBN1 · 48,445,430A;GMarfan syndrome mutationVery important
- rs140627FBN1 · 48,463,949C;Ccommon in clinvarTypical
- rs140630FBN1 · 48,465,580A;GFamilial thoracic aortic aneurysms and dissections (FTAAD)Very important
- rs140593FBN1 · 48,489,896C;Ccommon in clinvarTypical
- rs140583FBN1 · 48,495,219G;Gcommon in clinvarTypical
- rs140603FBN1 · 48,503,845C;GFamilial thoracic aortic aneurysms and dissections (FTAAD)Very important
- rs4775765FBN1 · 48,515,440C;Ccommon in clinvarTypical
- rs137854480FBN1 · 48,537,629G;Gcommon in clinvarTypical
- rs363853FBN1 · 48,596,292A;GMarfan syndrome mutationVery important
- rs25404FBN1 · 48,613,009C;TFamilial thoracic aortic aneurysms and dissections (FTAAD)Very important
- rs25403FBN1 · 48,613,073G;Gcommon in clinvarTypical
- rs2118181FBN1 · 48,623,687C;CX1.8 higher risk of Thoracic aortic dissection.Typical
- rs784411CEP152 · 48,747,600T;Tcommon in complete genomicsTypical
- rs16961557CEP152 · 48,755,931A;Acommon in clinvarTypical
- rs8023445SHC4 · 48,900,594T;Tcommon in complete genomicsTypical
- rs4338740FAM227B · 49,443,100T;Tcommon in complete genomicsTypical
- rs8039808DTWD1 · 49,647,649C;Ccommon in complete genomicsTypical
- rs10519262ATP8B4 · 50,140,297A;A>1.9x risk for ADTypical
- rs2073440HDC · 50,242,317T;Tcommon in complete genomicsTypical
- rs16963486HDC · 50,242,592A;Acommon in complete genomicsTypical
- rs267606861HDC · 50,252,520T;TTourette Syndrome mutationVery important
- rs17740607HDC · 50,263,347G;Gcommon on affy axiom dataTypical
- rs8031031GABPB1 · 50,305,127C;Ccommon in complete genomicsTypical
- rs7181866GABPB1 · 50,318,595G;GNo summary available.Important
- rs8042919TRPM7 · 50,586,433G;Gcommon on affy axiom dataTypical
- rs17520378TRPM7 · 50,608,409G;GNo summary available.Typical
- rs4646CYP19A1 · 51,210,647A;Acommon in clinvarTypical
- rs10046CYP19A1 · 51,210,789G;Gcommon in clinvarTypical
- rs17601241CYP19A1 · 51,215,677G;GNo summary available.Typical
- rs700519CYP19A1 · 51,215,771G;Gcommon in complete genomicsTypical
- rs28757184CYP19A1 · 51,222,375G;Gcommon in complete genomicsTypical
- rs16964201CYP19A1 · 51,223,154C;Ccommon in complete genomicsTypical
- rs2899472CYP19A1 · 51,223,858C;Ccommon on affy axiom dataTypical
- rs12594287CYP19A1 · 51,231,710G;Gcommon in complete genomicsTypical
- rs700518CYP19A1 · 51,236,915T;Tcommon in clinvarTypical
- rs17703883CYP19A1 · 51,237,900C;CNo summary available.Typical
- rs1062033CYP19A1 · 51,255,741C;Gincreases susceptibility to postmenopausal osteoporosisTypical
- rs3751599CYP19A1 · 51,281,336G;Gcommon genotypeTypical
- rs3764221CYP19A1 · 51,296,650G;Gcommon in complete genomicsTypical
- rs1902584CYP19A1 · 51,319,457A;Acommon in complete genomicsTypical
- rs1961177CYP19A1 · 51,332,881C;Ccommon in complete genomicsTypical
- rs6493497CYP19A1 · 51,338,638G;Gcommon in complete genomicsTypical
- rs1752547251,677,471T;Tcommon in complete genomicsTypical
- rs3764220SCG3 · 51,679,861A;Acommon in complete genomicsTypical
- rs16964465SCG3 · 51,680,150A;Acommon in complete genomicsTypical
- rs16964476SCG3 · 51,682,027A;Acommon in complete genomicsTypical
- rs1724577MYO5A · 52,397,434G;Gcommon in complete genomicsTypical
- rs2222656MYO5A · 52,480,826A;Acommon genotypeTypical
- rs17730281WDR72 · 53,615,751G;Gcommon in clinvarTypical
- rs1697603355,164,312A;Acommon in complete genomicsTypical
- rs11857829RAB27A · 55,289,044T;TNo summary available.Typical
- rs600753DYX1C1 · 55,466,995T;Tcommon in clinvarTypical
- rs716943156,048,698G;Gcommon in complete genomicsTypical
- rs155057657,921,216C;Ccommon on affy axiom dataTypical
- rs16939660ALDH1A2 · 58,010,689T;TNo summary available.Typical
- rs2414539LOC101928635 · 58,161,307A;Acommon in complete genomicsTypical
- rs16939881LOC101928635 · 58,179,780G;Gcommon genotypeTypical
- rs539901LOC101928635 · 58,382,470T;Tcommon genotypeTypical
- rs4775041LOC101928635 · 58,382,496C;Clowest phosphatidylethanolamine valuesTypical
- rs10468017LOC101928635 · 58,386,313C;Tassociated with higher HDL cholesterolWorth knowing
- rs493258LOC101928635 · 58,395,681C;T1.15x risk of Age Related Macular DegenerationWorth knowing
- rs16940212LOC101928635 · 58,401,821G;Gcommon in complete genomicsTypical
- rs1800588LOC101928635 · 58,431,476C;Thigher HDL-C levelsMinor
- rs2070895LIPC · 58,431,740G;Gcommon in complete genomicsTypical
- rs261334LIPC · 58,434,545C;Ccommon in complete genomicsTypical
- rs261332LIPC · 58,435,126A;Aassociated with higher HDL cholesterolWorth knowing
- rs261342LIPC · 58,438,954C;Ccommon in complete genomicsTypical
- rs12594375LIPC · 58,440,269G;Gcommon in complete genomicsTypical
- rs8023503LIPC · 58,448,389C;Ccommon in complete genomicsTypical
- rs3825776LIPC · 58,454,631C;C>1.3x increased risk for ALSWorth knowing
- rs6083LIPC · 58,545,811A;Acommon in clinvarTypical
- rs3829462LIPC · 58,560,880C;Ccommon in clinvarTypical
- rs2305421ADAM10 · 58,610,884A;Acommon in complete genomicsTypical
- rs61751103ADAM10 · 58,665,172C;Grare mutation increasing risk for late-onset Alzheimer's diseaseVery important
- rs980000RORA · 60,608,764C;Ccommon genotypeTypical
- rs3784609RORA · 60,618,351C;Ccommon in complete genomicsTypical
- rs339978RORA · 60,645,203C;Ccommon genotypeTypical
- rs1071646TPM1 · 63,059,641C;Ccommon in clinvarTypical
- rs1047552APH1B · 63,305,658G;G1.6x higher atherosclerosis risk only in malesTypical
- rs1051921063,445,726T;Tcommon in complete genomicsTypical
- rs12595292PLEKHO2 · 64,861,491G;Gcommon in complete genomicsTypical
- rs171927164,891,602A;Acommon in complete genomicsTypical
- rs938952CILP · 65,196,790T;TNo summary available.Typical
- rs2679117CILP · 65,197,350C;Ccommon in complete genomicsTypical
- rs2679118CILP · 65,198,563C;Ccommon in complete genomicsTypical
- rs2073711CILP · 65,201,874G;GBack Pain: normal (higher) risk of Lumbar Disc Disease.Worth knowing
- rs11858577SMAD6 · 66,774,225C;Ccommon/normalTypical
- rs17293443SMAD3 · 67,145,525C;Cslightly higher odds of giving birth to fraternal twinsMinor
- rs17228212SMAD3 · 67,166,301C;C>1.26x increased risk for heart diseaseWorth knowing
- rs8031627SMAD3 · 67,191,781G;Gcommon in clinvarTypical
- rs8038652IQCH · 67,259,726A;Ashorter adult height, at least among MongoliansTypical
- rs12593813MAP2K5 · 67,744,514A;A<0.71x risk for restless legsWorth knowing
- rs11635424MAP2K5 · 67,745,240A;A<0.70x risk for restless legsWorth knowing
- rs4489954MAP2K5 · 67,779,737T;T>0.69x risk of developing restless legs syndromeMinor
- rs3784709MAP2K5 · 67,779,937T;T>0.71x risk of developing restless legs syndromeMinor
- rs2241423MAP2K5 · 67,794,500A;A0.79 decreased risk for obesityWorth knowing
- rs1026732MAP2K5 · 67,802,747A;A<0.70x risk for restless legsWorth knowing
- rs649469667,810,868C;C<0.71x risk for restless legsTypical
- rs144502168,443,247T;TNo summary available.Typical
- rs11856323CORO2B · 68,600,650C;Ccommon on affy axiom dataTypical
- rs803067268,766,745T;Tcommon in complete genomicsTypical
- rs11072089PAQR5 · 69,357,714T;Tcommon in complete genomicsTypical
- rs10152591LOC107984788 · 69,755,818A;Acommon on affy axiom dataTypical
- rs649484970,188,275A;ANo summary available.Typical
- rs12902421MYO9A · 71,869,062T;Tcommon genotypeTypical
- rs147324677HEXA · 72,346,234G;GTay-Sachs disease (predicted)Very important
- rs28940871HEXA · 72,346,305C;C23andMe = Tay-Sachs disease likely, but on other platforms this may be the normal formVery important
- rs1800431HEXA · 72,346,551C;Ccommon in complete genomicsTypical
- rs387906309HEXA · 72,346,579TATC;TATCTay-Sachs disease (predicted)Very important
- rs76173977HEXA · 72,348,047T;TTay-Sachs diseaseVery important
- rs121907954HEXA · 72,350,518T;TTay-Sachs disease (predicted)Very important
- rs138058578HEXA · 72,350,578A;Alikely to lead to a false positive blood test for Tay SachsWorth knowing
- rs121907970HEXA · 72,350,584A;GCarrier of a Tay-Sachs pseudodeficiency alleleWorth knowing
- i4000440HEXA · 72,642,919A;Alikely to lead to a false positive blood test for Tay Sachs diseaseWorth knowing
- i4000442HEXA · 72,642,925A;Alikely to lead to a false positive blood test for Tay SachsWorth knowing
- rs2277598BBS4 · 72,735,137T;Tcommon in clinvarTypical
- rs2277596BBS4 · 72,736,927A;Acommon in clinvarTypical
- rs7164883HCN4 · 73,359,833A;Acommon/normalTypical
- rs11635553REC114 · 73,457,267G;Gcommon genotypeTypical
- rs7171755REC114 · 73,558,239A;Avery slight descrease in cortical thickness and IQ; see full descriptionMinor
- rs12914489TBC1D21 · 73,895,596G;GNo summary available.Typical
- rs1048661LOXL1-AS1 · 73,927,205G;Gpossibly higher glaucoma risk?Minor
- rs3825942LOXL1 · 73,927,241A;A10x to 27x lower risk of exfoliation glaucomaWorth knowing
- rs2165241LOXL1-AS1 · 73,929,861T;T>10x increased risk of exfoliation glaucomaWorth knowing
- rs201011613LOXL1 · 73,946,425A;TGreatly reduced risk (~25 fold) for exfoliation syndromeVery important
- rs8039584PML · 74,013,625C;CNo summary available.Typical
- rs2930291CCDC33 · 74,312,493G;G1.5x riskTypical
- rs6161CYP11A1 · 74,343,027C;TCarrier of a likely primary adrenal insufficiency mutationImportant
- rs2072649SEMA7A · 74,418,144G;GNo summary available.Typical
- rs1048943CYP1A1 · 74,720,644T;TNo summary available.Typical
- rs1799814CYP1A1 · 74,720,646G;Gcommon in complete genomicsTypical
- rs247229774,735,539C;TAssociated with (slightly) increased coffee consumptionMinor
- rs2069526CYP1A2 · 74,749,000G;GCYP1A2*1K_-739T>G homozygoteTypical
- rs12720461CYP1A2 · 74,749,010C;Tcarrier of one CYP1A2*1K_-729C>T allele, decreased CYP1A2 activityWorth knowing
- rs762551CYP1A2 · 74,749,576A;AFaster caffeine metabolism in smokers and heavy coffee consumersMinor
- rs72547513CYP1A2 · 74,750,296A;CNo summary available.Worth knowing
- rs3743484CYP1A2 · 74,752,059G;Gcommon genotypeTypical
- rs28399424CYP1A2 · 74,754,828C;Tcarrier of one CYP1A2*6 alleleWorth knowing
- rs2470890CYP1A2 · 74,755,085C;CCYP1A2_1545T>C homozygoteTypical
- rs8042694COX5A · 74,933,074A;Acommon/normalTypical
- rs9652490LINGO1 · 77,671,545A;A~2x increased risk for Parkinson's disease, and, essential tremorWorth knowing
- rs7168796AGPHD1 · 78,508,152T;Tcommon in complete genomicsTypical
- rs8034191AGPHD1 · 78,513,681C;C1.80x lung cancer risk; decreased response to alcoholWorth knowing
- rs12901682PSMA4 · 78,540,881C;Ccommon in complete genomicsTypical
- rs203652778,559,273G;GTend not to be a heavy smokerWorth knowing
- rs6495306CHRNA5 · 78,573,551G;GNo summary available.Worth knowing
- rs16969968CHRNA5 · 78,590,583A;Ahigher risk for nicotine dependence, lower risk for cocaine dependenceImportant
- rs578776CHRNA3 · 78,596,058G;Gcommon in clinvarTypical
- rs1051730CHRNA3 · 78,601,997A;A1.8x increased risk of lung cancer; reduced response to alcohol, therefore possibly increased risk of alcohol abuseWorth knowing
- rs3743076CHRNA3 · 78,616,885T;Tcommon in complete genomicsTypical
- rs12914008CHRNB4 · 78,631,163G;Gcommon genotypeTypical
- rs17487223CHRNB4 · 78,631,645T;T1.28x lung cancer riskWorth knowing
- rs6495446MTHFS · 79,862,640T;T0.64x reduced risk for chronic kidney diseaseWorth knowing
- rs11555096FAH · 80,180,184C;Ccommon in clinvarTypical
- rs80338901FAH · 80,180,230A;ATyrosinemia type IVery important
- rs4505265IL16 · 81,185,114A;Acommon in complete genomicsTypical
- rs4072111IL16 · 81,285,798C;Ccommon in complete genomicsTypical
- rs16973225LOC102724001 · 81,937,658A;Acommon/normal; aspirin use reduces colorectal cancer risk a bitWorth knowing
- rs2242047SLC28A1 · 84,935,465C;Ccommon in complete genomicsTypical
- rs16977195AGBL1 · 86,441,009A;Acommon on affy axiom dataTypical
- rs12591257AGBL1 · 86,520,858A;Acommon genotypeTypical
- rs17647114AGBL1 · 86,893,514G;Gcommon in complete genomicsTypical
- rs11636768LOC105370955 · 87,152,280G;Gcommon on affy axiom dataTypical
- rs1442295LOC105370956 · 87,419,456T;Tcommon in complete genomicsTypical
- rs16942341ACAN · 88,845,674C;Ccommon genotypeTypical
- rs3784757ACAN · 88,860,173G;Gcommon genotypeTypical
- rs113994097POLG · 89,323,426G;GAtaxias, including spinocerebellar ataxiaVery important
- rs803810889,546,045C;Ccommon genotypeTypical
- rs1110060KIF7 · 89,646,817A;Acommon in clinvarTypical
- rs6496589PLIN1 · 89,669,998G;Gcommon in clinvarTypical
- rs113993962BLM · 90,766,923-;-Bloom syndrome; homozygote for most common mutationVery important
- rs11852361BLM · 90,782,869C;Ccommon in complete genomicsTypical
- rs11073964VPS33B · 91,000,531C;Ccommon in clinvarTypical
- rs3924426SLCO3A1 · 91,902,643T;Tcommon in complete genomicsTypical
- rs1290501492,340,610T;Tcommon genotypeTypical
- rs145578292,507,736G;Gcommon on affy axiom dataTypical
- rs4777845LOC105370982 · 93,334,196T;Tcommon in complete genomicsTypical
- rs1052078995,598,638G;Gcommon in complete genomicsTypical
- rs9806400NR2F2-AS1 · 96,198,191T;Tcommon genotypeTypical
- rs2398162NR2F2-AS1 · 96,287,321A;A1.3x riskTypical
- rs151385997,207,105A;Acommon genotypeTypical
- rs1976667IGF1R · 98,693,273A;Acommon in complete genomicsTypical
- rs34516635IGF1R · 98,908,747A;APossibly increased longevity for Ashkenazi Jewish women.Minor
- rs3743262IGF1R · 98,922,244C;Ccommon in clinvarTypical
- rs2229765IGF1R · 98,934,996A;ALower IGF-1 levels; some reported associations with longevity as well as certain cancersWorth knowing
- rs12593811CHSY1 · 101,181,687T;Tcommon genotypeTypical
- rs9874SELENOS · 101,271,199T;Tcommon in complete genomicsTypical
No matches.
Source and license
Adapted from SNPedia, using a snapshot taken October 16, 2026. SNPedia content is shared under CC BY-NC-SA 3.0 US, and this page is shared under the same license.
SNPedia is a community-edited wiki. Its entries can be incomplete, out of date or wrong, and nothing here is a diagnosis or medical advice. Magnitude is a community rating of how interesting a genotype is, not a risk score.